Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 9343
Gene Symbol: EFTUD2
EFTUD2
0.010 Biomarker group BEFREE Heterozygous loss of function variants of EFTUD2 was previously reported in MFDM; however, the mechanism underlying EFTUD2-associated skeletal dysplasia remains unclear. 31806011 2019
Entrez Id: 55790
Gene Symbol: CSGALNACT1
CSGALNACT1
0.040 GeneticVariation group BEFREE Our data indicate that biallelic loss-of-function mutations in CSGALNACT1 disturb glycosaminoglycan synthesis and cause a mild skeletal dysplasia with advanced bone age, CSGALNACT1-CDG. 31705726 2020
Entrez Id: 1436
Gene Symbol: CSF1R
CSF1R
0.020 GeneticVariation group BEFREE Mono-allelic gain-of-function mutations in CSF1R in humans are associated with an autosomal-dominant leukodystrophy and bi-allelic loss-of-function mutations with recessive skeletal dysplasia, brain disorders, and developmental anomalies. 31330095 2020
Entrez Id: 55790
Gene Symbol: CSGALNACT1
CSGALNACT1
0.040 GeneticVariation group BEFREE We here identify a second case and the first juvenile patient with a homozygous frameshift variant in CSGALNACT1 which corroborates its role in mild and non-progressive skeletal dysplasia with joint laxity. 31325655 2019
Entrez Id: 1311
Gene Symbol: COMP
COMP
0.050 GeneticVariation group BEFREE The findings of the present study suggest consideration of the c.896 G>A variant of the COMP gene with respect to the genetic counseling of inherited skeletal dysplasia in Iran. 31177591 2019
Entrez Id: 1436
Gene Symbol: CSF1R
CSF1R
0.020 GeneticVariation group BEFREE Bi-allelic CSF1R Mutations Cause Skeletal Dysplasia of Dysosteosclerosis-Pyle Disease Spectrum and Degenerative Encephalopathy with Brain Malformation. 30982609 2019
Entrez Id: 4054
Gene Symbol: LTBP3
LTBP3
0.010 GeneticVariation group BEFREE Mutations in LTBP3 have been associated with various types of skeletal dysplasia. 30887145 2019
Entrez Id: 23761
Gene Symbol: PISD
PISD
0.300 Biomarker group GENOMICS_ENGLAND PISD is a mitochondrial disease gene causing skeletal dysplasia, cataracts, and white matter changes. 30858161 2019
Entrez Id: 406932
Gene Symbol: MIR140
MIR140
0.010 GeneticVariation group BEFREE Here we describe a neomorphic seed region mutation in the chondrocyte-specific, super-enhancer-associated MIR140 gene encoding microRNA-140 (miR-140) in a novel autosomal dominant human skeletal dysplasia. 30804514 2019
Entrez Id: 166929
Gene Symbol: SGMS2
SGMS2
0.010 GeneticVariation group BEFREE SGMS2 pathogenic variants underlie a spectrum of skeletal conditions, ranging from isolated osteoporosis to complex skeletal dysplasia, suggesting a critical role for plasma membrane-bound sphingomyelin metabolism in skeletal homeostasis. 30779713 2019
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.010 Biomarker group BEFREE Osteoma-like melorheostosis: a rare type of skeletal dysplasia depicted on FDG PET/CT. 30680447 2019
Entrez Id: 10682
Gene Symbol: EBP
EBP
0.030 Biomarker group BEFREE X-linked dominant chondrodysplasia punctata type 2 (CDPX2) is a condition involving facial, skin, and skeletal dysplasia as a result of a mutation in emopamil binding protein (EBP). 30608402 2019
Entrez Id: 54
Gene Symbol: ACP5
ACP5
0.010 GeneticVariation group BEFREE Spondyloenchondrodysplasia (SPENCD) is an autosomal recessive skeletal dysplasia by biallelic mutations in ACP5 gene encoding tartrate-resistant acid phosphatase (TRAP). 30558059 2018
Entrez Id: 64131
Gene Symbol: XYLT1
XYLT1
0.020 GeneticVariation group BEFREE Baratela-Scott syndrome (BSS) is a rare, autosomal-recessive disorder characterized by short stature, facial dysmorphisms, developmental delay, and skeletal dysplasia caused by pathogenic variants in XYLT1. 30554721 2019
Entrez Id: 55790
Gene Symbol: CSGALNACT1
CSGALNACT1
0.040 Biomarker group BEFREE Craniofacial abnormality with skeletal dysplasia in mice lacking chondroitin sulfate N-acetylgalactosaminyltransferase-1. 30459452 2018
Entrez Id: 55699
Gene Symbol: IARS2
IARS2
0.010 Biomarker group BEFREE This study further expands the phenotypic spectrum of IARS2 pathogenic variants to include two patients (patients 2 and 3) with cataract and skeletal dysplasia and no other features of CAGSSS to the possible presentation of the defects in IARS2. 30419932 2018
Entrez Id: 10586
Gene Symbol: MAB21L2
MAB21L2
0.020 Biomarker group BEFREE In addition to the eye abnormality, patients with MAB21L2 <sup>R51C/+</sup> mutation also have skeletal dysplasia and intellectual disability. 30375740 2018
Entrez Id: 4880
Gene Symbol: NPPC
NPPC
0.020 Biomarker group BEFREE We demonstrated that CNP-KO rats were useful as a reproducible animal model for skeletal dysplasia, due to their impairment in endochondral bone growth. 30235256 2018
Entrez Id: 9469
Gene Symbol: CHST3
CHST3
0.300 Biomarker group CTD_human Whole exome sequencing detects CHST3 mutation in patient with acute promyelocytic leukemia: A case report. 30200136 2018
Entrez Id: 3955
Gene Symbol: LFNG
LFNG
0.010 GeneticVariation group BEFREE A LFNG mutation is reported in a case of spondylocostal dysostosis (SCD), a skeletal dysplasia with severe malformations of vertebra and rib. 30196550 2018
Entrez Id: 5238
Gene Symbol: PGM3
PGM3
0.030 Biomarker group BEFREE Unlike the majority of reported PGM3 deficient patients she lacked skeletal dysplasia and had normal neurocognitive development. 30157810 2018
Entrez Id: 2261
Gene Symbol: FGFR3
FGFR3
0.200 AlteredExpression group BEFREE The pathology of small hypertrophic chondrocytes due to up-regulated FGFR3 signaling in FGFR3 skeletal dysplasia was recapitulated in growth plate cartilage formed in the xenografts of patient-specific hiPSC-derived cartilage. 30086379 2018
Entrez Id: 84068
Gene Symbol: SLC10A7
SLC10A7
0.310 GeneticVariation group BEFREE Using exome sequencing, we identify homozygous mutations in SLC10A7 in six individuals with skeletal dysplasia with multiple dislocations and amelogenesis imperfecta. 30082715 2018
Entrez Id: 89970
Gene Symbol: RSPRY1
RSPRY1
0.010 Biomarker group BEFREE In conclusion; we provide further evidence that Spondyloepimetaphyseal dysplasia Faden-Alkuraya type is a RSPRY1-associated skeletal dysplasia with a distinctive phenotype composed of spondyloepimetaphyseal dysplasia, cono-brachydactyly, and craniosynostosis along with recognizable facial features and intellectual disability. 30063090 2018
Entrez Id: 2261
Gene Symbol: FGFR3
FGFR3
0.200 Biomarker group BEFREE To explore the feasibility and accuracy of a noninvasive prenatal test for fibroblast growth factor receptor 3 (FGFR3)-related skeletal dysplasia based on next-generation sequencing (NGS) of plasma cell-free DNA. 30048571 2018